PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009590290.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 251aa    MW: 29063.7 Da    PI: 9.8015
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009590290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.63e-50141381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF+Ptdeelvv+yLk+kv + +l++ ++i+ev+i+k++PwdLp     +e+e yfFs+r+ ky++g+r+nrat+sgyWkatg dk+++s 
  XP_009590290.1  14 LPPGFRFRPTDEELVVQYLKRKVLSFPLPA-SIIPEVEIHKSDPWDLP---GDSEQERYFFSTREVKYPNGNRSNRATNSGYWKATGIDKQIVSC 104
                     79****************************.89***************...3467899**********************************997 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++lvglkktLvfy+g++p+g +t+W+mheyrl
  XP_009590290.1 105 kGQQLVGLKKTLVFYRGKSPHGCRTNWIMHEYRL 138
                     46777***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.23E-589165IPR003441NAC domain
PROSITE profilePS5100557.92814165IPR003441NAC domain
PfamPF023658.8E-2715138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010089Biological Processxylem development
GO:0010150Biological Processleaf senescence
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MEKLSFVKNG VLRLPPGFRF RPTDEELVVQ YLKRKVLSFP LPASIIPEVE IHKSDPWDLP  60
GDSEQERYFF STREVKYPNG NRSNRATNSG YWKATGIDKQ IVSCKGQQLV GLKKTLVFYR  120
GKSPHGCRTN WIMHEYRLAN LETTSIQAKN NLTQEKWVLC RIFLKRRDSK NEEENITHEV  180
FNNRNTRANS GNKKKPMFYD FMAREREDLN GSVAASTSFS GSSGITHELT TNESDDHEES  240
SSFTTFRKQW P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B4e-531217015170NAC domain-containing protein 19
4dul_A4e-531217015170NAC domain-containing protein 19
1ut7_B4e-531217015170NO APICAL MERISTEM PROTEIN
1ut7_A4e-531217015170NO APICAL MERISTEM PROTEIN
1ut4_B4e-531217015170NO APICAL MERISTEM PROTEIN
1ut4_A4e-531217015170NO APICAL MERISTEM PROTEIN
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00507DAPTransfer from AT5G13180Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009590289.10.0PREDICTED: NAC transcription factor 29-like
RefseqXP_009590290.10.0PREDICTED: NAC transcription factor 29-like
SwissprotQ9FY938e-94NAC83_ARATH; NAC domain-containing protein 83
TrEMBLA0A0M4FP121e-117A0A0M4FP12_MANES; NAC transcription factors 34
STRINGPOPTR_0001s13380.11e-115(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-93NAC domain containing protein 83